Попробовал еще так тоже не помогло:
Код:

(for /f "usebackq delims=" %i in (`dir /b /a:-d "*.mov"`) do @echo file '%~i') | "\timelaps\fine\ffmpeg.exe" -safe 0 -protocol_whitelist "file,http,https,tcp,tls,pipe" -f concat -i - -vcodec copy "\timelaps\fine\Result2.mp4"
Код:

(for /f "usebackq delims=" %i in (`dir /b /a:-d "*.mov"`) do @echo file '%~i') | "\timelaps\fine\ffmpeg.exe" -safe 0 -protocol_whitelist "file,http,https,tcp,tls,pipe" -f concat -i - -vcodec copy -movflags faststart "\timelaps\fine\fine\Result3.mov"
Код:

(for /f "usebackq delims=" %i in (`dir /b /a:-d "*.mov"`) do @echo file '%~i') | "\timelaps\fine\ffmpeg.exe" -safe 0 -protocol_whitelist "file,http,https,tcp,tls,pipe" -f concat -i - -vcodec copy "\timelaps\fine\fine\Result3.mov"